Fossil SCM

fossil-scm / www / image-format-vs-repo-size.ipynb

Source Blame History 1719 lines

05f95db…	wyoung	1	{
05f95db…	wyoung	2	"cells": [
05f95db…	wyoung	3	{
05f95db…	wyoung	4	"cell_type": "markdown",
05f95db…	wyoung	5	"metadata": {},
05f95db…	wyoung	6	"source": [
05f95db…	wyoung	7	"# Image Format vs Fossil Repository Size\n",
05f95db…	wyoung	8	"\n",
05f95db…	wyoung	9	"## Prerequisites\n",
05f95db…	wyoung	10	"\n",
f281b3d…	wyoung	11	"This notebook was originally developed with standalone [JupyterLab] and Python 2 but was later moved to JupyterLab under [Anaconda] with Python 3. Backporting to Python 2 may require manual adjustment. Getting it running under stock JupyterLab or plain-old-Jupyter should be straightforward for one familiar with the tools. We will assume you're following in my footsteps, using Anaconda.\n",
f281b3d…	wyoung	12	"\n",
f281b3d…	wyoung	13	"One of the reasons we switched to Anaconda is that it comes with all but one of this notebook's prerequisites, that last remaining one of which you install so:\n",
f281b3d…	wyoung	14	"\n",
f281b3d…	wyoung	15	" $ pip install wand\n",
f281b3d…	wyoung	16	"\n",
f281b3d…	wyoung	17	"That should be done in a shell where \"`pip`\" is the version that came with Anaconda. Otherwise, the package will likely end up in some other Python package tree, which Anaconda's Python kernel may not be smart enough to find on its own.\n",
f281b3d…	wyoung	18	"\n",
f281b3d…	wyoung	19	"Note that you do not use `conda` for this: as of this writing, [Wand] is not available in a form that installs via `conda`.\n",
f281b3d…	wyoung	20	"\n",
f281b3d…	wyoung	21	"This notebook was written and tested on a macOS system where `/tmp` exists. Other platforms may require adjustments to the scripts below.\n",
f281b3d…	wyoung	22	"\n",
f281b3d…	wyoung	23	"[Anaconda]: https://www.anaconda.com/distribution/\n",
f281b3d…	wyoung	24	"[JupyterLab]: https://github.com/jupyterlab/\n",
f281b3d…	wyoung	25	"[Wand]: http://wand-py.org/\n",
05f95db…	wyoung	26	"\n",
05f95db…	wyoung	27	"\n",
05f95db…	wyoung	28	"## Running\n",
05f95db…	wyoung	29	"\n",
f281b3d…	wyoung	30	"The next cell generates the test repositories. This takes about 3 seconds to run on my machine. If you have to uncomment the \"`sleep`\" call in the inner loop, this will go up to about 45 seconds.\n",
41e5237…	wyoung	31	"\n",
f281b3d…	wyoung	32	"The next cell produces the bar chart from the collected data, all but instantaneously.\n",
05f95db…	wyoung	33	"\n",
41e5237…	wyoung	34	"This split allows you to generate the expensive experimental data in a single pass, then play as many games as you like with the generated data.\n",
05f95db…	wyoung	35	"\n",
05f95db…	wyoung	36	"\n",
05f95db…	wyoung	37	"## Discussion\n",
05f95db…	wyoung	38	"\n",
05f95db…	wyoung	39	"That is kept in [a separate document](image-format-vs-repo-size.md) so we can share that document with Fossil's Markdown renderer."
05f95db…	wyoung	40	]
05f95db…	wyoung	41	},
05f95db…	wyoung	42	{
05f95db…	wyoung	43	"cell_type": "code",
f85d924…	wyoung	44	"execution_count": 1,
05f95db…	wyoung	45	"metadata": {},
f85d924…	wyoung	46	"outputs": [
f85d924…	wyoung	47	{
f85d924…	wyoung	48	"name": "stdout",
f85d924…	wyoung	49	"output_type": "stream",
f85d924…	wyoung	50	"text": [
f281b3d…	wyoung	51	"Created test directory /tmp/image-format-vs-repo-size\n",
f281b3d…	wyoung	52	"Created ../test-jpeg.fossil for format JPEG.\n",
f281b3d…	wyoung	53	"Created ../test-bmp.fossil for format BMP.\n",
f281b3d…	wyoung	54	"Created ../test-tiff.fossil for format TIFF.\n",
f281b3d…	wyoung	55	"Created ../test-png.fossil for format PNG.\n",
f281b3d…	wyoung	56	"Experiment completed in 3.0627901554107666 seconds.\n"
f85d924…	wyoung	57	]
f85d924…	wyoung	58	}
f85d924…	wyoung	59	],
05f95db…	wyoung	60	"source": [
05f95db…	wyoung	61	"import os\n",
05f95db…	wyoung	62	"import random\n",
f281b3d…	wyoung	63	"import subprocess\n",
05f95db…	wyoung	64	"import time\n",
05f95db…	wyoung	65	"\n",
05f95db…	wyoung	66	"from wand.color import Color\n",
05f95db…	wyoung	67	"from wand.drawing import Drawing\n",
05f95db…	wyoung	68	"from wand.image import Image\n",
05f95db…	wyoung	69	"\n",
05f95db…	wyoung	70	"import pandas as pd\n",
05f95db…	wyoung	71	"\n",
05f95db…	wyoung	72	"size = 256\n",
05f95db…	wyoung	73	"iterations = 10\n",
41e5237…	wyoung	74	"start = time.time()\n",
05f95db…	wyoung	75	"repo_sizes = []\n",
f281b3d…	wyoung	76	"fossil = '/usr/local/bin/fossil'\n",
f281b3d…	wyoung	77	"\n",
f281b3d…	wyoung	78	"if not os.path.isfile(fossil): raise RuntimeError(\"No such executable \" + fossil)\n",
f281b3d…	wyoung	79	"if not os.access(fossil, os.X_OK): raise RuntimeError(\"Cannot execute \" + fossil)\n",
05f95db…	wyoung	80	"\n",
f281b3d…	wyoung	81	"tdir = os.path.join('/tmp', 'image-format-vs-repo-size')\n",
f281b3d…	wyoung	82	"if not os.path.isdir(tdir): os.mkdir(tdir, 0o700)\n",
f281b3d…	wyoung	83	"print(\"Created test directory \" + tdir)\n",
f281b3d…	wyoung	84	" \n",
05f95db…	wyoung	85	"formats = ['JPEG', 'BMP', 'TIFF', 'PNG']\n",
05f95db…	wyoung	86	"for f in formats:\n",
05f95db…	wyoung	87	" ext = f.lower()\n",
f281b3d…	wyoung	88	" wdir = os.path.join(tdir, 'work-' + ext)\n",
f281b3d…	wyoung	89	" if not os.path.isdir(wdir): os.mkdir(wdir, 0o700)\n",
f281b3d…	wyoung	90	" os.chdir(wdir)\n",
f281b3d…	wyoung	91	" repo = '../test-' + ext + '.fossil'\n",
05f95db…	wyoung	92	" ifn = 'test.' + ext\n",
f281b3d…	wyoung	93	" ipath = os.path.join(wdir, ifn)\n",
05f95db…	wyoung	94	" rs = []\n",
05f95db…	wyoung	95	" \n",
05f95db…	wyoung	96	" def add_repo_size():\n",
05f95db…	wyoung	97	" rs.append(os.path.getsize(repo) / 1024.0 / 1024.0)\n",
f281b3d…	wyoung	98	" \n",
f281b3d…	wyoung	99	" def set_repo_page_size(n):\n",
f281b3d…	wyoung	100	" subprocess.run([\n",
f281b3d…	wyoung	101	" fossil,\n",
f281b3d…	wyoung	102	" 'rebuild',\n",
f281b3d…	wyoung	103	" '--compress',\n",
f281b3d…	wyoung	104	" '--pagesize',\n",
f281b3d…	wyoung	105	" str(n),\n",
f281b3d…	wyoung	106	" '--vacuum'\n",
f281b3d…	wyoung	107	" ])\n",
05f95db…	wyoung	108	"\n",
05f95db…	wyoung	109	" try:\n",
05f95db…	wyoung	110	" # Create test repo\n",
f281b3d…	wyoung	111	" subprocess.run([fossil, 'init', repo])\n",
f281b3d…	wyoung	112	" subprocess.run([fossil, 'open', repo])\n",
f281b3d…	wyoung	113	" subprocess.run([fossil, 'set', 'binary-glob', \"*.{0}\".format(ext)])\n",
f281b3d…	wyoung	114	" set_repo_page_size(512) # minimum\n",
05f95db…	wyoung	115	" add_repo_size()\n",
f281b3d…	wyoung	116	" set_repo_page_size(8192) # default\n",
f281b3d…	wyoung	117	" print(\"Created \" + repo + \" for format \" + f + \".\")\n",
05f95db…	wyoung	118	"\n",
05f95db…	wyoung	119	" # Create test image and add it to the repo\n",
05f95db…	wyoung	120	" img = Image(width = size, height = size, depth = 8,\n",
05f95db…	wyoung	121	" background = 'white')\n",
05f95db…	wyoung	122	" img.alpha_channel = 'remove'\n",
05f95db…	wyoung	123	" img.evaluate('gaussiannoise', 1.0)\n",
05f95db…	wyoung	124	" img.save(filename = ipath)\n",
f281b3d…	wyoung	125	" subprocess.run([fossil, 'add', ifn])\n",
f281b3d…	wyoung	126	" subprocess.run([fossil, 'ci', '-m', 'initial'])\n",
f281b3d…	wyoung	127	" #print(\"Added initial \" + f + \" image.\")\n",
05f95db…	wyoung	128	" add_repo_size()\n",
05f95db…	wyoung	129	"\n",
05f95db…	wyoung	130	" # Change a random pixel to a random RGB value and check it in\n",
05f95db…	wyoung	131	" # $iterations times.\n",
f281b3d…	wyoung	132	" for i in range(iterations - 1):\n",
05f95db…	wyoung	133	" with Drawing() as draw:\n",
05f95db…	wyoung	134	" x = random.randint(0, size - 1)\n",
05f95db…	wyoung	135	" y = random.randint(0, size - 1)\n",
05f95db…	wyoung	136	"\n",
05f95db…	wyoung	137	" r = random.randint(0, 255)\n",
05f95db…	wyoung	138	" g = random.randint(0, 255)\n",
05f95db…	wyoung	139	" b = random.randint(0, 255)\n",
05f95db…	wyoung	140	" \n",
05f95db…	wyoung	141	" draw.fill_color = Color('rgb({0},{1},{2})'.format(\n",
05f95db…	wyoung	142	" r, g, b\n",
05f95db…	wyoung	143	" ))\n",
05f95db…	wyoung	144	" draw.color(x, y, 'point')\n",
05f95db…	wyoung	145	" draw(img)\n",
05f95db…	wyoung	146	" img.save(filename = ipath)\n",
05f95db…	wyoung	147	" \n",
f281b3d…	wyoung	148	" # You might need to uncomment the next line if you find that\n",
f281b3d…	wyoung	149	" # the repo size doesn't change as expected. In some versions\n",
f281b3d…	wyoung	150	" # of Wand (or is it the ImageMagick underneath?) we have seen\n",
f281b3d…	wyoung	151	" # what appear to be asynchronous saves, with a zero-length file\n",
f281b3d…	wyoung	152	" # here if you don't wait for the save to complete.\n",
f281b3d…	wyoung	153	" #time.sleep(1.0)\n",
05f95db…	wyoung	154	" \n",
f281b3d…	wyoung	155	" subprocess.run([fossil, 'ci', '-m', '\"change {0} step {1}'.format(\n",
f281b3d…	wyoung	156	" f, i\n",
f281b3d…	wyoung	157	" )])\n",
05f95db…	wyoung	158	" add_repo_size()\n",
05f95db…	wyoung	159	" \n",
05f95db…	wyoung	160	" # Repo complete for this format\n",
05f95db…	wyoung	161	" repo_sizes.append(pd.Series(rs, name=f))\n",
05f95db…	wyoung	162	"\n",
05f95db…	wyoung	163	" finally:\n",
05f95db…	wyoung	164	" if os.path.exists(ipath): os.remove(ipath)\n",
05f95db…	wyoung	165	" if os.path.exists(tdir):\n",
f281b3d…	wyoung	166	" if os.path.isfile(repo):\n",
f281b3d…	wyoung	167	" subprocess.run([fossil, 'close', '-f'])\n",
f281b3d…	wyoung	168	" os.unlink(repo)\n",
f281b3d…	wyoung	169	" os.chdir(tdir);\n",
f281b3d…	wyoung	170	" os.rmdir(wdir)\n",
41e5237…	wyoung	171	" if os.path.exists(repo): os.remove(repo)\n",
41e5237…	wyoung	172	" \n",
41e5237…	wyoung	173	"print(\"Experiment completed in \" + str(time.time() - start) + \" seconds.\")"
41e5237…	wyoung	174	]
41e5237…	wyoung	175	},
41e5237…	wyoung	176	{
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f281b3d…	wyoung	178	"execution_count": 1,
41e5237…	wyoung	179	"metadata": {},
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f85d924…	wyoung	1635	"L 19.390625 60.984375 \n",
f85d924…	wyoung	1636	"L 19.390625 0 \n",
f85d924…	wyoung	1637	"L 9.8125 0 \n",
f85d924…	wyoung	1638	"z\n",
f85d924…	wyoung	1639	"\" id=\"DejaVuSans-78\"/>\n",
f85d924…	wyoung	1640	" </defs>\n",
f281b3d…	wyoung	1641	" <g transform=\"translate(80.78125 67.832812)scale(0.1 -0.1)\">\n",
f85d924…	wyoung	1642	" <use xlink:href=\"#DejaVuSans-80\"/>\n",
f85d924…	wyoung	1643	" <use x=\"60.302734\" xlink:href=\"#DejaVuSans-78\"/>\n",
f85d924…	wyoung	1644	" <use x=\"135.107422\" xlink:href=\"#DejaVuSans-71\"/>\n",
f85d924…	wyoung	1645	" </g>\n",
f85d924…	wyoung	1646	" </g>\n",
f85d924…	wyoung	1647	" </g>\n",
f85d924…	wyoung	1648	" </g>\n",
f85d924…	wyoung	1649	" </g>\n",
f85d924…	wyoung	1650	" <defs>\n",
f281b3d…	wyoung	1651	" <clipPath id=\"p70301a0bed\">\n",
f281b3d…	wyoung	1652	" <rect height=\"217.44\" width=\"334.8\" x=\"43.78125\" y=\"7.2\"/>\n",
f85d924…	wyoung	1653	" </clipPath>\n",
f85d924…	wyoung	1654	" </defs>\n",
f85d924…	wyoung	1655	"</svg>\n"
f85d924…	wyoung	1656	],
f85d924…	wyoung	1657	"text/plain": [
f85d924…	wyoung	1658	"<Figure size 432x288 with 1 Axes>"
f85d924…	wyoung	1659	]
f85d924…	wyoung	1660	},
f85d924…	wyoung	1661	"metadata": {
f85d924…	wyoung	1662	"needs_background": "light"
f85d924…	wyoung	1663	},
f85d924…	wyoung	1664	"output_type": "display_data"
f85d924…	wyoung	1665	}
f85d924…	wyoung	1666	],
41e5237…	wyoung	1667	"source": [
41e5237…	wyoung	1668	"%config InlineBackend.figure_formats = ['svg']\n",
41e5237…	wyoung	1669	"\n",
41e5237…	wyoung	1670	"import matplotlib as mpl\n",
41e5237…	wyoung	1671	"import matplotlib.pyplot as plt\n",
f281b3d…	wyoung	1672	"import pandas as pd\n",
f281b3d…	wyoung	1673	"\n",
f281b3d…	wyoung	1674	"os.chdir(tdir)\n",
41e5237…	wyoung	1675	"\n",
41e5237…	wyoung	1676	"# Merge per-format test data into a single DataFrame without the first\n",
f281b3d…	wyoung	1677	"# first row, being the boring initial empty repo state.\n",
f281b3d…	wyoung	1678	"data = pd.concat(repo_sizes, axis=1).drop(range(1))\n",
41e5237…	wyoung	1679	"\n",
41e5237…	wyoung	1680	"mpl.rcParams['figure.figsize'] = (6, 4)\n",
41e5237…	wyoung	1681	"ax = data.plot(kind = 'bar', colormap = 'coolwarm',\n",
41e5237…	wyoung	1682	" grid = False, width = 0.8,\n",
41e5237…	wyoung	1683	" edgecolor = 'white', linewidth = 2)\n",
41e5237…	wyoung	1684	"ax.axes.set_xlabel('Checkin index')\n",
41e5237…	wyoung	1685	"ax.axes.set_ylabel('Repo size (MiB)')\n",
41e5237…	wyoung	1686	"plt.savefig('image-format-vs-repo-size.svg', transparent=True)\n",
41e5237…	wyoung	1687	"plt.show()"
05f95db…	wyoung	1688	]
05f95db…	wyoung	1689	},
05f95db…	wyoung	1690	{
05f95db…	wyoung	1691	"cell_type": "code",
05f95db…	wyoung	1692	"execution_count": null,
05f95db…	wyoung	1693	"metadata": {},
05f95db…	wyoung	1694	"outputs": [],
41e5237…	wyoung	1695	"source": []
05f95db…	wyoung	1696	}
05f95db…	wyoung	1697	],
05f95db…	wyoung	1698	"metadata": {
05f95db…	wyoung	1699	"kernelspec": {
f85d924…	wyoung	1700	"display_name": "Python 3",
05f95db…	wyoung	1701	"language": "python",
f85d924…	wyoung	1702	"name": "python3"
05f95db…	wyoung	1703	},
05f95db…	wyoung	1704	"language_info": {
05f95db…	wyoung	1705	"codemirror_mode": {
05f95db…	wyoung	1706	"name": "ipython",
f85d924…	wyoung	1707	"version": 3
05f95db…	wyoung	1708	},
05f95db…	wyoung	1709	"file_extension": ".py",
05f95db…	wyoung	1710	"mimetype": "text/x-python",
05f95db…	wyoung	1711	"name": "python",
05f95db…	wyoung	1712	"nbconvert_exporter": "python",
f85d924…	wyoung	1713	"pygments_lexer": "ipython3",
f281b3d…	wyoung	1714	"version": "3.7.6"
05f95db…	wyoung	1715	}
05f95db…	wyoung	1716	},
05f95db…	wyoung	1717	"nbformat": 4,
f281b3d…	wyoung	1718	"nbformat_minor": 4
05f95db…	wyoung	1719	}

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